Publications

Jul, 2026

Journal

Eddy Covariance Theory: A Review

Eddy covariance (EC), the gold standard for measuring ecosystem scale gas and heat exchanges, has transformed our understanding of the breathing of the biosphere, and thus global change biology. Despite numerous methodological improvements and insights gained from the technique, the community faces persistent challenges that have been present since the first EC measurement…

Jul, 2026

Journal

Coupling of high-resolution mass spectrometer and photosynthesis system for comprehensive leaf volatile metabolite profiling

Background: Leaf-level biogenic volatile organic compounds (BVOCs) emissions represent a major source of organic gases in the atmosphere, influencing both climate and air quality. These emissions are strongly driven by environmental perturbations, which affect individual plant- to ecosystem-level processes. Uncovering all the BVOCs and understanding how their emissions res…

Feb, 2026

Journal

Evaluating ecosystem water use efficiency and recovery dynamics during flash droughts: insights from observations and model simulations

Flash droughts (FD), rapidly emerging in a warming future, disrupt ecosystems, agriculture, and water security. Ecosystem water use efficiency (WUE), the ratio of gross primary production (GPP) to actual evapotranspiration (AET), balances carbon assimilation and water loss. FD rapidly disrupts this balance, making WUE critical for assessing plant stress and recovery. This…

Dec, 2025

Journal

Measurement report: Extreme heat and wildfire emissions enhance volatile organic compounds in a temperate forest

Climate extremes are projected to cause unprecedented deviations in the emission and transformation of volatile organic compounds (VOCs), which trigger feedback mechanisms that will impact the atmospheric oxidation and formation of aerosols and clouds. However, the response of VOCs to future conditions such as extreme heat and wildfire events is still uncertain. This study…

Nov, 2025

Journal

Measurement report: Extreme heat and wildfire emissions enhance volatile organic compounds in a temperate forest

Climate extremes are projected to cause unprecedented deviations in the emission and transformation of volatile organic compounds (VOCs), which trigger feedback mechanisms that will impact the atmospheric oxidation and formation of aerosols and clouds. However, the response of VOCs to future conditions such as extreme heat and wildfire events is still uncertain. This study…

Aug, 2025

Journal

Inferring Plant Acclimation and Improving Model Generalizability With Differentiable Physics-Informed Machine Learning of Photosynthesis

Net photosynthesis (AN) is a key component of the global carbon cycle influencing climate feedback over decadal scales. Although plant acclimation to environmental changes can modify AN, traditional vegetation models in Earth system models (ESMs) often rely on plant functional type (PFT)-specific parameterizations or simplified acclimation assumptions limiting generalizabi…

Aug, 2025

Journal

Influence of fertilization on the dynamics of energy use in wheat

Plant energy use is fundamental to plant survival and growth. However, we still lack effective means to quantify plant energy use strategies. This study introduced a concept quantifying the light level at which photochemical and non-photochemical energy use in plants are in equilibrium — the photochemical compensation point (PCCP) which can be determined with chlorophyll f…

Aug, 2025

Journal

Concurrent Measurement of O2 Production and Isoprene Emission During Photosynthesis: Pros, Cons and Metabolic Implications of Responses to Light, CO2 and Temperature

Traditional leaf gas exchange experiments have focused on net CO2 exchange (Anet). Here, using California poplar (Populus trichocarpa), we coupled measurements of net oxygen production (NOP), isoprene emissions and δ18O in O2 to traditional CO2/H2O gas exchange with chlorophyll fluorescence, and measured light, CO2 and temperature response curves. This allowed us to obtain…

Aug, 2025

Journal

Terrestrial photosynthesis inferred from plant carbonyl sulfide uptake

Terrestrial photosynthesis, or gross primary production (GPP), is the largest carbon flux in the biosphere, but its global magnitude and spatiotemporal dynamics remain uncertain1. The global annual mean GPP is historically thought to be around 120 PgC yr−1 (refs. 2,3,4,5,6), which is about 30–50 PgC yr−1 lower than GPP inferred from the oxygen-18 (18O) isotope7 and soil re…

Aug, 2025

Journal

The Ecological Impacts of Dry and Hot Shocks in the Land of Midnight Sun

Jun, 2025

Journal

Regulatory coordination of photophysical, photochemical, and biochemical reactions in the photosynthesis of land plants

Balance among the sequential photophysical, photochemical, and biochemical reactions of photosynthesis is needed for converting fleeting energy in light to stable energy in chemical bonds. Any imbalance acts as either a bottleneck for limiting photosynthetic efficiency or an agent for inducing structural and functional damage to photosynthetic apparatus. Not only must each…

Feb, 2025

Journal

The roles of photochemical and non-photochemical quenching in regulating photosynthesis depend on the phases of fluctuating light conditions

The induction and relaxation of photochemistry and non-photochemical quenching (NPQ) are not instantaneous and require time to respond to fluctuating environments. There is a lack of integrated understanding on how photochemistry and NPQ influence photosynthesis in fluctuating environments. We measured the induction and relaxation of chlorophyll a fluorescence and gas exch…