Showing 12 results for Author: Ian D. Goethert
May, 2026
Journal
Objectives: This study aimed to identify and quantify semantic drift (ie, the change in semantic meaning over time) within expert-defined anxiety-related (AR) terminology and compare it to common electronic health record (EHR) vocabulary across longitudinal pediatric clinical notes. Materials and Methods: A corpus of pediatric clinical notes from 2009 to 2022 was analyzed…
Aug, 2025
Journal
Objective: To compare the utilization patterns of expert vocabulary (EVo) in diagnosing pediatric anxiety between mental health and non-mental health clinical notes from electronic health records to understand the role of Evo in informing classification and decision-making in anxiety diagnoses. Study design: We conducted a retrospective study using a cohort less than age 2…
Jun, 2025
Journal
This study aims to assess the impact of domain shift on chest X-ray classification accuracy and to analyze the influence of ground truth label quality and demographic factors such as age group, sex, and study year. We used a DenseNet121 model pre-trained MIMIC-CXR dataset for deep learning-based multi-label classification using ground truth labels from radiology reports ex…
Apr, 2025
ORNL Report
World-leading research requires state-of-the-art systems for research and innovation. Operational excellence is the key component of scientific excellence by implementing ubiquitous security, repeatable processes, streamlined policies, and reliable and robust infrastructure. Building a research environment to meet these needs is a complex and expensive task. In many cases,…
Jul, 2024
Journal
One of the justifiable criticisms of human genetic studies is the underrepresentation of participants from diverse populations. Lack of inclusion must be addressed at-scale to identify causal disease factors and understand the genetic causes of health disparities. We present genome-wide associations for 2068 traits from 635,969 participants in the Department of Veterans Af…
Dec, 2023
ORNL Report
This report describes what is required in a data management plan for data that needs to be protected in some fashion. Here we provide an overview of what a data manager should consider, including the data ingestion and various extract-transform-load processes, metadata considerations and documentation, to what might need to be accounted for in the event of data loss. In ad…
Nov, 2023
Journal
Hydroxychloroquine (HCQ) was proposed as an early therapy for coronavirus disease 2019 (COVID-19) after in vitro studies indicated possible benefit. Previous in vivo observational studies have presented conflicting results, though recent randomized clinical trials have reported no benefit from HCQ amongst hospitalized COVID-19 patients. We examined the effects of HCQ alone…
Nov, 2023
Journal
The predictive modeling literature for biomedical applications is dominated by biostatistical methods for survival analysis, and more recently some out of the box machine learning approaches. In this article, we show a presentation of a machine learning method appropriate for time-to-event modeling in the area of prostate cancer long-term disease progression. Using XGBoost…
Apr, 2022
Conference Paper
Data Lakehouse is a new paradigm in data architectures that embodies and integrates already established concepts for the systematic management of disparate, large-scale data – a data lake for heterogeneous data management, use of open standards for high-performance querying, and systematic maintenance of the data "freshness". In addition to being a new concept, the data la…